Basic Information
Locus ID:
gene:ENSEOMG00000012489
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
UBC4
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 16 | 48021081 | 48025441 | - | gene:ENSEOMG00000012489 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.21 | 19,052.00 Da | 46.81 | 65.59 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 1 | 128 | 1.1232E-49 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 3 | 127 | 7.6E-38 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 4 | 133 | 9.22E-45 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 144 | 1.7E-47 | IPR016135 |
| SMART | SM00212 | ubc_7 | 1 | 133 | 1.0E-42 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 133 | 41.562088 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 58 | 74 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 168 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_021748191.1 | ubiquitin-conjugating enzyme E2 4-like [Chenopodium quinoa] | 0 |
| P42748 | Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803KZC1 | UBC core domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology