Basic Information
Locus ID:
gene:ENSEOMG00000011617
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 14 | 915595 | 918340 | + | gene:ENSEOMG00000011617 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 83,882.43 Da | 45.10 | 89.08 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 475 | 738 | 2.0E-116 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 135 | 294 | 6.3E-23 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 129 | 262 | 6.83E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 103 | 354 | 2.2E-48 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 60 | 740 | 7.1E-209 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 132 | 362 | 27.120871 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 53 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_021760714.1 | translocase of chloroplast 90, chloroplastic-like isoform X1 [Chenopodium quinoa] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LH39 | AIG1-type G domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology