halophFGD

Basic Information

Locus ID: gene:ENSEOMG00000011612

Species & Taxonomic ID: Chenopodium album & 3559

Genome Assembly: GCA_948465745.1

Description: Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
13	888512	890079	-	gene:ENSEOMG00000011612

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.30	24,885.09 Da	35.59	87.72	-0.36

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00305	Lipoxygenase	1	180	1.6E-94	IPR013819
SUPERFAMILY	SSF48484	Lipoxigenase	1	219	8.89E-85	IPR036226
Gene3D	G3DSA:1.20.245.10	-	180	218	5.9E-7	-
Gene3D	G3DSA:1.20.245.10	-	1	179	6.2E-76	-
ProSiteProfiles	PS51393	Lipoxygenase iron-binding catalytic domain profile.	180	219	14.173445	IPR013819
ProSiteProfiles	PS51393	Lipoxygenase iron-binding catalytic domain profile.	1	179	80.595543	IPR013819

Gene Ontology

Molecular Function:

GO:0016702 (oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen) GO:0046872 (metal ion binding)

KEGG Pathway

KO Term:

K00454 (lipoxygenase [EC:1.13.11.12])

Pathway:

ko00591 (Linoleic acid metabolism) map00591 (Linoleic acid metabolism) ko00592 (alpha-Linolenic acid metabolism) map00592 (alpha-Linolenic acid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Module:

M00113 (Jasmonic acid biosynthesis)

Reaction:

R03626 (Linoleate + Oxygen <=> (9Z,11E)-(13S)-13-Hydroperoxyoctadeca-9,11-dienoic acid) R07864 ((9Z,12Z,15Z)-Octadecatrienoic acid + Oxygen <=> 9(S)-HPOT) R07869 ((9Z,12Z,15Z)-Octadecatrienoic acid + Oxygen <=> 13(S)-HPOT)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G45140.2	-
RefSeq	XP_021773242.1	linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Chenopodium quinoa]
Swiss-Prot	P38418	Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1
TrEMBL	A0A803KM16	Lipoxygenase OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000011612
Apiaceae	Apium graveolens	3	Ag9G02002, Ag9G02003, Ag9G02004
Asparagaceae	Asparagus officinalis	1	AsparagusV1_09.982.V1.1
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG04.1243
Poaceae	Sporobolus alterniflorus	1	Chr15G011610
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_10_RagTag.1404