Basic Information
Locus ID:
gene:ENSEOMG00000011465
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 14 | 7318240 | 7320189 | + | gene:ENSEOMG00000011465 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.43 | 26,289.35 Da | 43.71 | 68.47 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 180 | 224 | 5.7E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 181 | 227 | 1.71E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 159 | 229 | 1.3E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 182 | 223 | 6.7E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 182 | 224 | 12.710573 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021750231.1 | E3 ubiquitin ligase BIG BROTHER-related-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LGV8 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14054 |
| Amaranthaceae | Atriplex hortensis | 8 | Ah002233, Ah009874, Ah009885, Ah014959, Ah014962, Ah014966 ... |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_9g215960, BVRB_9g215970 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017607 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl33425, Sgl38793 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000011465, gene:ENSEOMG00000030076 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0016950, CQ.Regalona.r1.8BG0017900 |