Basic Information
Locus ID:
gene:ENSEOMG00000011056
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 13 | 47765096 | 47770496 | - | gene:ENSEOMG00000011056 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 89,797.89 Da | 55.05 | 80.55 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 589 | 623 | 4.2E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 672 | 707 | 0.0025 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 69 | 284 | 2.05E-19 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 498 | 809 | 6.48E-53 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 73 | 285 | 2.6E-24 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 476 | 812 | 1.9E-119 | IPR015943 |
| SMART | SM00320 | WD40_4 | 766 | 810 | 58.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 495 | 530 | 1.1 | IPR001680 |
| SMART | SM00220 | serkin_6 | 11 | 275 | 0.0011 | IPR000719 |
| SMART | SM00320 | WD40_4 | 669 | 707 | 2.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 583 | 623 | 1.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 626 | 665 | 0.79 | IPR001680 |
| SMART | SM00320 | WD40_4 | 716 | 755 | 4.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 541 | 580 | 29.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 590 | 627 | 10.706503 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 590 | 632 | 13.917108 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 676 | 709 | 9.889235 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 275 | 11.184955 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 676 | 709 | 11.845179 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 694 | 708 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 694 | 708 | 5.2E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 567 | 581 | 5.2E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 610 | 624 | 5.2E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 447 | - | - |
| Coils | Coil | Coil | 288 | 308 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_021722829.1 | protein SPA1-RELATED 4-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LVC8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology