Basic Information
Locus ID:
gene:ENSEOMG00000011018
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| 13 | 53742763 | 53748229 | + | gene:ENSEOMG00000011018 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 81,639.71 Da | 36.78 | 93.28 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 44 | 346 | 1.36591E-156 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 363 | 661 | 1.89106E-143 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 368 | 657 | 8.8E-29 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 44 | 346 | 2.59E-39 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 363 | 661 | 4.97E-42 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 361 | 661 | 1.9E-44 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 42 | 346 | 1.6E-34 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 363 | 662 | 33.37936 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 44 | 347 | 36.424397 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_021759068.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Chenopodium quinoa] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9RMD9 | glycerophosphodiester phosphodiesterase OS=Spinacia oleracea OX=3562 GN=SOVF_050320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology