Basic Information
Locus ID:
gene:ENSEOMG00000010800
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 13 | 2516303 | 2527986 | - | gene:ENSEOMG00000010800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 78,148.40 Da | 47.95 | 80.50 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 3 | 102 | 7.54983E-12 | - |
| Pfam | PF00169 | PH domain | 2 | 106 | 2.3E-13 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 163 | 222 | 8.1E-6 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 500 | 580 | 1.8E-21 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 163 | 294 | 1.18E-13 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 1 | 106 | 2.0E-17 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 1 | 109 | 7.8E-17 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 132 | 225 | 1.5E-8 | IPR008936 |
| SMART | SM00233 | PH_update | 1 | 109 | 2.7E-16 | IPR001849 |
| ProSiteProfiles | PS50003 | PH domain profile. | 1 | 107 | 15.7985 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 442 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 402 | - | - |
| Coils | Coil | Coil | 656 | 683 | - | - |
| Coils | Coil | Coil | 549 | 583 | - | - |
| Coils | Coil | Coil | 183 | 203 | - | - |
| Coils | Coil | Coil | 490 | 531 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_021772176.1 | rho GTPase-activating protein 7-like isoform X1 [Chenopodium quinoa] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KMD9 | Rho GTPase-activating protein 7-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology