HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:ENSEOMG00000010407
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: Phosphoinositide 3-kinase regulatory subunit
Maps and Mapping Data
Chromosome Start End Strand ID
14 4557133 4559477 - gene:ENSEOMG00000010407
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.42 23,617.71 Da 48.13 81.16 -0.43
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like 21 214 1.96E-10 IPR011047
Gene3D G3DSA:2.130.10.10 - 5 215 4.6E-11 IPR015943
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile. 182 215 9.810144 -
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. 182 215 10.074014 IPR001680
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K08333 (phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1])
Pathway:
ko04136 (Autophagy - other) map04136 (Autophagy - other) ko04138 (Autophagy - yeast) map04138 (Autophagy - yeast) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G29380.2 - 0
RefSeq XP_021723524.1 probable serine/threonine-protein kinase vps15 [Chenopodium quinoa] 0
Swiss-Prot Q9M0E5 Serine/threonine-protein kinase VPS15 OS=Arabidopsis thaliana OX=3702 GN=VPS15 PE=1 SV=1 0
TrEMBL A0A0K9RNX7 non-specific serine/threonine protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_044880 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg31661
Aizoaceae Mesembryanthemum crystallinum 1 gene_9125
Amaranthaceae Atriplex hortensis 1 Ah014666
Amaranthaceae Beta vulgaris 1 BVRB_8g197640
Amaranthaceae Salicornia bigelovii 2 Sbi_jg25085, Sbi_jg8931
Amaranthaceae Salicornia europaea 1 Seu_jg19665
Amaranthaceae Suaeda aralocaspica 2 GOSA_00007712, GOSA_00014470
Amaranthaceae Suaeda glauca 3 Sgl42324, Sgl42361, Sgl47098
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000010407, gene:ENSEOMG00000032907 ...
gene:ENSEOMG00000047200
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.5AG0016740, CQ.Regalona.r1.8AG0019210 ...
CQ.Regalona.r1.8BG0023190
Anacardiaceae Pistacia vera 1 pistato.v30257460
Apiaceae Apium graveolens 5 Ag5G01593, Ag5G01594, Ag5G01595, Ag5G01596, Ag8G00324
Arecaceae Cocos nucifera 1 COCNU_01G005400
Arecaceae Phoenix dactylifera 1 gene-LOC103724252
Asparagaceae Asparagus officinalis 1 AsparagusV1_08.775.V1.1
Asteraceae Flaveria trinervia 1 Ftri14G10793
Brassicaceae Arabidopsis thaliana 1 AT4G29380.1
Brassicaceae Eutrema salsugineum 1 Thhalv10024212m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp7g27250.v2.2
Brassicaceae Brassica nigra 1 BniB05g008240.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq06G1569
Casuarinaceae Casuarina glauca 1 Cgl06G1628
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno02g19760
Dunaliellaceae Dunaliella salina 3 Dusal.0353s00010.v1.0, Dusal.0353s00013.v1.0 ...
Dusal.0353s00014.v1.0
Hydrocharitaceae Thalassia testudinum 1 gene.Thate01g02000
Nitrariaceae Nitraria sibirica 2 evm.TU.LG03.1291, evm.TU.LG07.1165
Plantaginaceae Plantago ovata 1 Pov_00039668
Plumbaginaceae Limonium bicolor 3 Lb5G26415, Lb5G26416, Lb5G26417
Poaceae Echinochloa crus-galli 3 AH07.3788, BH07.3608, CH07.3684
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_2AG0149040, gene-QOZ80_2BG0205210
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.6HG0624570.1
Poaceae Oryza coarctata 2 Oco03G024280, Oco04G024740
Poaceae Oryza sativa 1 LOC_Os02g55340.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G188700, gene-BS78_04G166200
Poaceae Puccinellia tenuiflora 1 Pt_Chr0206297
Poaceae Sporobolus alterniflorus 2 Chr09G017650, Chr13G001830
Poaceae Thinopyrum elongatum 1 Tel6E01G640500
Poaceae Triticum dicoccoides 2 gene_TRIDC6AG053930, gene_TRIDC6BG062800
Poaceae Triticum aestivum 3 TraesCS6A02G360100.2, TraesCS6B02G393000.1 ...
TraesCS6D02G343100.1
Poaceae Zea mays 2 Zm00001eb192340_P002, Zm00001eb257890_P001
Poaceae Zoysia japonica 1 nbis-gene-8425
Poaceae Zoysia macrostachya 1 Zma_g14626
Portulacaceae Portulaca oleracea 4 evm.TU.LG02.2791, evm.TU.LG03.2042, evm.TU.LG14.343 ...
evm.TU.LG23.996
Posidoniaceae Posidonia oceanica 1 gene.Posoc02g02510
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_4_RagTag.1891
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-25694
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-15219
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-4667
Rhizophoraceae Kandelia candel 1 evm.TU.utg000008l.1078
Rhizophoraceae Kandelia obovata 1 Maker00001255
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-14804
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-1178
Salicaceae Populus euphratica 1 populus_peu09190
Solanaceae Lycium barbarum 1 gene-LOC132613469
Solanaceae Solanum chilense 1 SOLCI005936100
Solanaceae Solanum pennellii 1 gene-LOC107017746
Tamaricaceae Reaumuria soongarica 1 gene_8037
Tamaricaceae Tamarix chinensis 2 TC10G1503, TC12G1319
Zosteraceae Zostera marina 2 Zosma01g16780.v3.1, Zosma04g25780.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.