Basic Information
Locus ID:
gene:ENSEOMG00000009927
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 14 | 1807751 | 1808641 | + | gene:ENSEOMG00000009927 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 32,499.37 Da | 49.55 | 106.71 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 23 | 60 | 1.6E-9 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 47 | 262 | 8.63E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 59 | 2.45E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 63 | 9.5E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 101 | 281 | 9.2E-11 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 20 | 70 | 11.696505 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52680.2 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_021761777.1 | uncharacterized protein LOC110726612 [Chenopodium quinoa] | 0 |
| Q9LXJ6 | F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN=At3g52680 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2R6PF10 | F-box/LRR-repeat protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30174 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 7 | Ah023203, Ah023944, Ah028596, Ah028601, Ah028833, Ah035632 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019563 |
| Amaranthaceae | Chenopodium album | 8 | gene:ENSEOMG00000009927, gene:ENSEOMG00000016680 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.2AG0017870 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18895 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132613385, gene-LOC132622071, gene-LOC132636488 |