HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000008467
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: Protein of unknown function (DUF1618)
Maps and Mapping Data
Chromosome Start End Strand ID
13 51091068 51093396 - gene:ENSEOMG00000008467
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.20 50,921.64 Da 40.71 90.59 0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 3 40 1.5E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 1 76 1.83E-14 IPR036047
Gene3D G3DSA:1.20.1280.50 - 1 40 2.8E-7 -
SMART SM00256 fbox_2 4 43 1.8E-5 IPR001810
ProSiteProfiles PS50181 F-box domain profile. 1 47 12.14691 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G15680.1 F-box family protein. 0
RefSeq XP_021758808.1 putative F-box/kelch-repeat protein At1g15680 [Chenopodium quinoa] 0
Swiss-Prot Q9LMR4 Putative F-box/kelch-repeat protein At1g15680 OS=Arabidopsis thaliana OX=3702 GN=At1g15680 PE=4 SV=1 0
TrEMBL A0A803LYJ0 TPR_REGION domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 4 Ah008549, Ah008600, Ah008601, Ah008613
Amaranthaceae Beta vulgaris 1 BVRB_8g191430
Amaranthaceae Salicornia bigelovii 4 Sbi_jg30187, Sbi_jg42307, Sbi_jg43620, Sbi_jg44894
Amaranthaceae Salicornia europaea 2 Seu_jg18290, Seu_jg27235
Amaranthaceae Suaeda aralocaspica 2 GOSA_00026239, GOSA_00026240
Amaranthaceae Chenopodium album 7 gene:ENSEOMG00000008467, gene:ENSEOMG00000011066 ...
gene:ENSEOMG00000011913, gene:ENSEOMG00000027597, gene:ENSEOMG00000031581, gene:ENSEOMG00000041481, gene:ENSEOMG00000042965
Amaranthaceae Chenopodium quinoa 7 CQ.Regalona.r1.2AG0005750, CQ.Regalona.r1.4AG0021520 ...
CQ.Regalona.r1.4AG0021550, CQ.Regalona.r1.4AG0021790, CQ.Regalona.r1.4AG0021860, CQ.Regalona.r1.4BG0022490, CQ.Regalona.r1.4BG0022820
Poaceae Echinochloa crus-galli 47 AH01.4507, AH01.746, AH02.1029, AH02.611, AH02.85, AH04.1736 ...
AH05.1079, AH05.3857, AH06.1260, AH08.1530, AH08.1956, BH01.2045, BH02.1169, BH02.1170, BH02.603, BH04.1728, BH05.1124, BH05.2116, BH05.2119, BH05.2120, BH05.3919, BH05.3923, BH06.1307, BH06.1308, BH06.1309, BH06.467, BH08.1472, BH08.2055, CH01.5125, CH01.5126, CH01.800, CH02.87, CH02.88, CH02.93, CH03.1419, CH03.3159, CH05.2184, CH05.4137, CH06.1450, CH08.1716, CH08.2227, CH08.2228, CH08.2230, CH08.2231, CH08.2232, Contig192.147, Contig328.97
Poaceae Eleusine coracana subsp. coracana 31 gene-QOZ80_1AG0027520, gene-QOZ80_1BG0048530 ...
gene-QOZ80_1BG0054320, gene-QOZ80_1BG0054330, gene-QOZ80_1BG0077690, gene-QOZ80_2AG0129600, gene-QOZ80_2AG0133540, gene-QOZ80_2BG0184860, gene-QOZ80_2BG0189070, gene-QOZ80_2BG0205830, gene-QOZ80_3AG0239020, gene-QOZ80_3AG0239030, gene-QOZ80_3AG0239040, gene-QOZ80_3AG0245640, gene-QOZ80_3AG0245650, gene-QOZ80_3BG0282480, gene-QOZ80_3BG0282490, gene-QOZ80_3BG0286690, gene-QOZ80_3BG0288940, gene-QOZ80_3BG0288950, gene-QOZ80_3BG0288960, gene-QOZ80_3BG0288970, gene-QOZ80_5AG0369430, gene-QOZ80_5BG0416660, gene-QOZ80_5BG0417130, gene-QOZ80_6AG0518820, gene-QOZ80_6AG0518840, gene-QOZ80_6AG0518850, gene-QOZ80_6BG0470900, gene-QOZ80_6BG0470950, gene-QOZ80_8AG0629140
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.2HG0135030.1, HORVU.MOREX.r3.3HG0235230.1 ...
HORVU.MOREX.r3.3HG0235510.1, HORVU.MOREX.r3.3HG0235520.1, HORVU.MOREX.r3.3HG0250520.1, HORVU.MOREX.r3.3HG0250540.1, HORVU.MOREX.r3.3HG0250550.1, HORVU.MOREX.r3.3HG0257080.1, HORVU.MOREX.r3.7HG0707820.1
Poaceae Lolium multiflorum 1 gene-QYE76_051742
Poaceae Oryza coarctata 12 Oco01G006330, Oco01G006510, Oco01G006520, Oco02G006430 ...
Oco02G006650, Oco02G006670, Oco02G006690, Oco02G006730, Oco06G013670, Oco09G017830, Oco10G005420, Oco13G015140
Poaceae Oryza sativa 19 LOC_Os01g13810.1, LOC_Os01g13860.1, LOC_Os01g13870.1 ...
LOC_Os01g14170.1, LOC_Os01g14180.1, LOC_Os01g14220.1, LOC_Os01g14280.1, LOC_Os01g14310.1, LOC_Os01g14320.1, LOC_Os01g14340.1, LOC_Os03g02090.1, LOC_Os03g21600.2, LOC_Os03g47920.1, LOC_Os03g53440.1, LOC_Os05g02100.1, LOC_Os05g18660.1, LOC_Os06g06610.1, LOC_Os09g27670.1, LOC_Os12g06550.1
Poaceae Paspalum vaginatum 25 gene-BS78_01G096200, gene-BS78_01G436000, gene-BS78_K061500 ...
gene-BS78_03G239600, gene-BS78_05G174100, gene-BS78_07G178600, gene-BS78_08G043300, gene-BS78_08G043400, gene-BS78_08G043500, gene-BS78_08G043700, gene-BS78_08G044300, gene-BS78_08G044400, gene-BS78_08G044800, gene-BS78_08G134200, gene-BS78_08G134400, gene-BS78_08G134500, gene-BS78_08G134600, gene-BS78_08G134700, gene-BS78_08G134800, gene-BS78_10G125000, gene-BS78_10G125200, gene-BS78_10G125500, gene-BS78_10G129300, gene-BS78_10G129400, gene-BS78_K215900
Poaceae Puccinellia tenuiflora 11 Pt_Chr0205312, Pt_Chr0205413, Pt_Chr0400740, Pt_Chr0400782 ...
Pt_Chr0603755, Pt_Chr0603838, Pt_Chr0604103, Pt_Chr0604133, Pt_Chr0604189, Pt_Chr0604190, Pt_Chr0604191
Poaceae Sporobolus alterniflorus 13 Chr01G027770, Chr01G032920, Chr02G010320, Chr02G026180 ...
Chr09G014620, Chr0G006000, Chr12G006660, Chr12G011660, Chr13G010640, Chr14G006110, Chr21G005660, Chr21G005670, Chr24G005300
Poaceae Thinopyrum elongatum 13 Tel3E01G176000, Tel3E01G176500, Tel3E01G176700 ...
Tel3E01G272200, Tel3E01G287600, Tel3E01G288500, Tel3E01G288700, Tel3E01G288800, Tel3E01G289300, Tel3E01G296400, Tel3E01G324700, Tel7E01G846400, Tel7E01G846500
Poaceae Triticum dicoccoides 12 gene_TRIDC3AG022110, gene_TRIDC3AG022220 ...
gene_TRIDC3AG022250, gene_TRIDC3AG022970, gene_TRIDC3BG016510, gene_TRIDC3BG025640, gene_TRIDC3BG025690, gene_TRIDC3BG025730, gene_TRIDC3BG027080, gene_TRIDC3BG029970, gene_TRIDC4BG031630, gene_TRIDC7AG069210
Poaceae Triticum aestivum 37 TraesCS2B02G429700.1, TraesCS2D02G214400.1 ...
TraesCS3A02G101000.1, TraesCS3A02G161600.1, TraesCS3A02G162200.1, TraesCS3A02G162300.1.cds1, TraesCS3A02G162400.1, TraesCS3A02G162700.1.cds1, TraesCS3A02G162800.1, TraesCS3A02G167900.1, TraesCS3B02G118400.1, TraesCS3B02G118500.1, TraesCS3B02G182900.1, TraesCS3B02G192100.1, TraesCS3B02G192900.1, TraesCS3B02G193300.1, TraesCS3B02G193600.1, TraesCS3B02G193700.1, TraesCS3B02G193800.1.cds1, TraesCS3B02G193900.2, TraesCS3B02G198400.1, TraesCS3B02G218000.1, TraesCS3D02G102400.1, TraesCS3D02G164100.1, TraesCS3D02G168800.1, TraesCS3D02G170100.1, TraesCS3D02G170200.1.cds1, TraesCS3D02G174100.1, TraesCS3D02G192200.1, TraesCS3D02G192300.1, TraesCS4A02G123200.1, TraesCS4B02G181200.1, TraesCS4D02G182700.1, TraesCS7A02G495200.1.cds1, TraesCS7A02G495300.1.cds1, TraesCS7B02G402000.1, TraesCS7D02G482700.1.cds1
Poaceae Zea mays 19 Zm00001eb083050_P001, Zm00001eb083060_P001 ...
Zm00001eb083080_P001, Zm00001eb083090_P001, Zm00001eb083100_P001, Zm00001eb119370_P001, Zm00001eb119380_P001, Zm00001eb130660_P001, Zm00001eb130840_P001, Zm00001eb192970_P001, Zm00001eb234910_P001, Zm00001eb240250_P001, Zm00001eb240260_P001, Zm00001eb240270_P001, Zm00001eb240290_P001, Zm00001eb240300_P001, Zm00001eb284040_P001, Zm00001eb284050_P002, Zm00001eb284060_P001
Poaceae Zoysia japonica 7 nbis-gene-28974, nbis-gene-28979, nbis-gene-28982 ...
nbis-gene-28985, nbis-gene-28986, nbis-gene-3515, nbis-gene-3516
Poaceae Zoysia macrostachya 5 Zma_g29564, Zma_g29566, Zma_g29567, Zma_g31804, Zma_g3768
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.