Basic Information
Locus ID:
gene:ENSEOMG00000007962
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
UPL4
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 12 | 35101664 | 35115241 | + | gene:ENSEOMG00000007962 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 169,295.19 Da | 45.46 | 94.34 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1132 | 1507 | 4.04869E-100 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1178 | 1507 | 3.3E-67 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1125 | 1506 | 1.02E-79 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 96 | 552 | 9.49E-36 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 106 | 557 | 4.0E-48 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1077 | 1307 | 2.3E-38 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1412 | 1511 | 8.6E-25 | - |
| SMART | SM00119 | hect_3 | 1144 | 1512 | 4.2E-70 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1146 | 1525 | 51.313114 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1108 | 1128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 827 | 855 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 828 | 855 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1108 | 1123 | - | - |
| Coils | Coil | Coil | 1015 | 1035 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.2 | - | 0 |
| RefSeq | XP_021751622.1 | E3 ubiquitin-protein ligase UPL4-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803N3U7 | HECT-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology