Basic Information
Locus ID:
gene:ENSEOMG00000007647
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 12 | 4737138 | 4747033 | - | gene:ENSEOMG00000007647 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 84,905.02 Da | 40.80 | 79.67 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 225 | 477 | 7.2E-77 | IPR024729 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 487 | 697 | 2.2E-58 | IPR029346 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 4 | 121 | 1.2E-16 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 3 | 152 | 1.06E-28 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1 | 125 | 1.0E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 403 | 500 | 2.2E-28 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 285 | 402 | 2.1E-43 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 124 | 17.658096 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 40 | 57 | - | IPR018200 |
| Coils | Coil | Coil | 133 | 164 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_021720606.1 | ubiquitin carboxyl-terminal hydrolase 12 [Chenopodium quinoa] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QHB6 | ubiquitinyl hydrolase 1 (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_179260 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology