Basic Information
Locus ID:
gene:ENSEOMG00000006606
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
CPK20
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 11 | 36395843 | 36397436 | - | gene:ENSEOMG00000006606 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.31 | 16,139.94 Da | 19.35 | 87.53 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13499 | EF-hand domain pair | 1 | 58 | 3.5E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 68 | 129 | 3.3E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 1 | 130 | 4.64E-44 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 67 | 139 | 5.7E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 66 | 5.1E-20 | - |
| SMART | SM00054 | efh_1 | 33 | 61 | 0.0082 | IPR002048 |
| SMART | SM00054 | efh_1 | 1 | 25 | 0.16 | IPR002048 |
| SMART | SM00054 | efh_1 | 69 | 97 | 4.5E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 103 | 131 | 2.9E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 29 | 64 | 10.775421 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 65 | 100 | 15.350267 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 103 | 134 | 12.923368 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 1 | 28 | 13.816021 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 112 | 124 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 6 | 18 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 78 | 90 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 42 | 54 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021721304.1 | calcium-dependent protein kinase 20-like [Chenopodium quinoa] | 0 |
| Q9ZV15 | Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CPK20 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803MWE4 | Calcium-dependent protein kinase 20 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah033093, Ah036874 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl68967 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000004643, gene:ENSEOMG00000006606 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.3BG0009830, CQ.Regalona.r1.7BG0018650 ... |
| Apiaceae | Apium graveolens | 2 | Ag2G01810, Ag8G00088 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1311.V1.1 |
| Brassicaceae | Brassica nigra | 2 | BniB01g043470.2N, BniB03g056960.2N |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1650 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.915 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032026 |
| Poaceae | Echinochloa crus-galli | 1 | CH04.446 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G003830 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G027700 |
| Poaceae | Zea mays | 2 | Zm00001eb015740_P001, Zm00001eb168390_P001 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-18442, nbisL1-mrna-18491 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5501 |
| Zosteraceae | Zostera marina | 1 | Zosma03g22750.v3.1 |