Basic Information
Locus ID:
gene:ENSEOMG00000006445
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 11 | 10883802 | 10884627 | + | gene:ENSEOMG00000006445 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.22 | 16,919.14 Da | 29.55 | 98.85 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 7 | 69 | 4.53363E-15 | IPR002048 |
| CDD | cd00051 | EFh | 82 | 144 | 1.04313E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 82 | 143 | 5.1E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 6 | 67 | 1.4E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 2 | 143 | 4.3E-41 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 74 | 2.1E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 75 | 151 | 3.5E-23 | - |
| SMART | SM00054 | efh_1 | 118 | 146 | 5.1E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 43 | 71 | 0.054 | IPR002048 |
| SMART | SM00054 | efh_1 | 82 | 110 | 2.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 7 | 35 | 0.017 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 3 | 38 | 13.927603 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 114 | 149 | 12.867577 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 39 | 74 | 11.138062 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 78 | 113 | 14.122869 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 127 | 139 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 52 | 64 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 16 | 28 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 91 | 103 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_021761238.1 | probable calcium-binding protein CML15 [Chenopodium quinoa] | 0 |
| Q9LI84 | Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R3U8 | Calcium-binding protein CML16 OS=Spinacia oleracea OX=3562 GN=SOVF_109880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology