Basic Information
Locus ID:
gene:ENSEOMG00000006372
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 11 | 5804238 | 5806664 | - | gene:ENSEOMG00000006372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 21,379.59 Da | 60.97 | 60.59 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 7 | 143 | 3.06169E-49 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 16 | 142 | 2.8E-40 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 5 | 149 | 7.74E-47 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 159 | 1.5E-51 | IPR016135 |
| SMART | SM00212 | ubc_7 | 4 | 148 | 1.6E-45 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 148 | 43.222855 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 73 | 89 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 188 | - | - |
| Coils | Coil | Coil | 132 | 152 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_021718973.1 | ubiquitin-conjugating enzyme E2-23 kDa-like [Chenopodium quinoa] | 0 |
| P42748 | Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803L8Q7 | UBC core domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology