Basic Information
Locus ID:
gene:ENSEOMG00000006338
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Zinc ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 11 | 6978849 | 6985392 | + | gene:ENSEOMG00000006338 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 51,738.05 Da | 54.26 | 61.87 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 348 | 390 | 8.0559E-18 | - |
| Pfam | PF05495 | CHY zinc finger | 218 | 293 | 7.9E-17 | IPR008913 |
| Pfam | PF13639 | Ring finger domain | 346 | 389 | 1.5E-8 | IPR001841 |
| Pfam | PF14599 | Zinc-ribbon | 395 | 452 | 3.5E-22 | IPR039512 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 284 | 341 | 6.28E-17 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 212 | 274 | 1.14E-15 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 347 | 395 | 8.99E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 341 | 392 | 6.2E-11 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 419 | 454 | 8.7E-17 | - |
| SMART | SM00184 | ring_2 | 348 | 389 | 2.9E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 348 | 390 | 11.648357 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 283 | 347 | 27.115389 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 211 | 280 | 23.363609 | IPR008913 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18910.1 | zinc ion binding;zinc ion binding. | 0 |
| RefSeq | XP_021761695.1 | zinc finger protein BRUTUS-like At1g18910 isoform X1 [Chenopodium quinoa] | 0 |
| F4IDY5 | Zinc finger protein BRUTUS-like At1g18910 OS=Arabidopsis thaliana OX=3702 GN=At1g18910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M1C4 | GCFC domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology