Basic Information
Locus ID:
gene:ENSEOMG00000005692
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
neutrophil clearance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 12 | 10452715 | 10456031 | + | gene:ENSEOMG00000005692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 59,670.70 Da | 43.27 | 84.42 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 203 | 478 | 2.41666E-97 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 54 | 8.3E-5 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 82 | 120 | 8.8E-7 | IPR025875 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 201 | 473 | 3.0E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 195 | 486 | 7.49E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 168 | 3.21E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 188 | 1.4E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 189 | 274 | 8.0E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 275 | 499 | 7.2E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 103 | 126 | 6.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 127 | 152 | 9.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 80 | 102 | 120.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 197 | 479 | 4.3E-37 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 82 | 104 | 7.704254 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 197 | 479 | 39.495354 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 322 | 334 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 203 | 225 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021749640.1 | receptor-like kinase TMK4 [Chenopodium quinoa] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RIU5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_061690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology