Basic Information
Locus ID:
gene:ENSEOMG00000005474
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 12 | 17948974 | 17957782 | - | gene:ENSEOMG00000005474 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 21,447.99 Da | 49.70 | 51.03 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14599 | Zinc-ribbon | 113 | 170 | 4.9E-25 | IPR039512 |
| Pfam | PF13639 | Ring finger domain | 64 | 108 | 7.4E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 65 | 112 | 1.54E-12 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 2 | 59 | 2.09E-20 | IPR037275 |
| Gene3D | G3DSA:2.20.28.10 | - | 136 | 180 | 1.4E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 59 | 111 | 8.0E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 66 | 108 | 1.8E-7 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1 | 65 | 31.408888 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 66 | 109 | 12.017182 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62970.1 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_021730929.1 | E3 ubiquitin-protein ligase MIEL1-like isoform X1 [Chenopodium quinoa] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RX36 | RING finger and CHY zinc finger domain-containing protein 1 OS=Spinacia oleracea OX=3562 GN=SOVF_019950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology