Basic Information
Locus ID:
gene:ENSEOMG00000005361
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 11 | 7200398 | 7202978 | - | gene:ENSEOMG00000005361 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 33,668.53 Da | 51.02 | 83.48 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 8 | 49 | 4.6E-6 | IPR001810 |
| Pfam | PF14299 | Phloem protein 2 | 103 | 289 | 7.9E-36 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 89 | 6.8E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 132 | 2.5E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 50 | 11.564033 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02240.1 | F-box family protein. | 0 |
| RefSeq | XP_021733782.1 | putative F-box protein PP2-B12 isoform X1 [Chenopodium quinoa] | 0 |
| Q3E6P4 | F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M1A6 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah000980 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000005361, gene:ENSEOMG00000022751 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0021320, CQ.Regalona.r1.5BG0022660 |