Basic Information
Locus ID:
gene:ENSEOMG00000005186
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
40S ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 10 | 61960364 | 61962729 | + | gene:ENSEOMG00000005186 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.73 | 13,562.75 Da | 35.18 | 86.86 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 23 | 117 | 6.3E-28 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 21 | 118 | 1.44E-30 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 6 | 120 | 3.1E-48 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 23 | 117 | 1.6E-38 | IPR027486 |
| TIGRFAM | TIGR01046 | uS10_euk_arch: ribosomal protein uS10 | 20 | 118 | 2.6E-40 | IPR005729 |
| ProSitePatterns | PS00361 | Ribosomal protein S10 signature. | 45 | 60 | - | IPR018268 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 78 | 92 | 6.3E-14 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 56 | 71 | 6.3E-14 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 21 | 34 | 6.3E-14 | IPR001848 |
| Hamap | MF_00508 | 30S ribosomal protein S10 [rpsJ]. | 19 | 118 | 18.547941 | IPR001848 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47370.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_021730227.1 | 40S ribosomal protein S20-2-like [Chenopodium quinoa] | 0 |
| Q9STY6 | Small ribosomal subunit protein uS10y OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MTS1 | Ribosomal_S10 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology