Basic Information
Locus ID:
gene:ENSEOMG00000005045
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 11 | 44367467 | 44374947 | - | gene:ENSEOMG00000005045 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 48,210.41 Da | 46.08 | 85.20 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 248 | 419 | 6.26488E-62 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 152 | 418 | 6.1E-34 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 135 | 420 | 1.53E-53 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 130 | 423 | 2.1E-55 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 52 | 421 | 30.017962 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 365 | 382 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021771254.1 | ubiquitin carboxyl-terminal hydrolase 8-like isoform X5 [Chenopodium quinoa] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803MJX1 | Ubiquitin carboxyl-terminal hydrolase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology