Basic Information
Locus ID:
gene:ENSEOMG00000004473
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 12 | 38204314 | 38208476 | + | gene:ENSEOMG00000004473 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 55,227.38 Da | 52.96 | 89.66 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 256 | 304 | 1.60105E-14 | - |
| Pfam | PF12906 | RING-variant domain | 256 | 303 | 1.8E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 252 | 307 | 1.5E-13 | - |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 337 | 447 | 6.15E-5 | IPR036259 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 239 | 311 | 3.7E-16 | IPR013083 |
| SMART | SM00744 | ringv_2 | 255 | 304 | 4.9E-20 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 248 | 310 | 19.979101 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 497 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09760.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021745417.1 | E3 ubiquitin-protein ligase MARCH7-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803NAV5 | RING-CH-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology