HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000004056
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: Cold-regulated 413 plasma membrane protein 4-like
Maps and Mapping Data
Chromosome Start End Strand ID
1 84533595 84538183 + gene:ENSEOMG00000004056
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.70 19,851.47 Da 47.95 115.73 1.08
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF05562 Cold acclimation protein WCOR413 24 149 3.3E-22 IPR008892
Gene Ontology
Cellular Component:
GO:0016020 (membrane)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021855990.1 cold-regulated 413 plasma membrane protein 4-like [Spinacia oleracea] 0
TrEMBL A0A0K9RV42 Cold-regulated 413 plasma membrane protein 2 OS=Spinacia oleracea OX=3562 GN=SOVF_025200 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_16925
Amaranthaceae Beta vulgaris 1 BVRB_6g137990
Amaranthaceae Salicornia bigelovii 2 Sbi_jg37768, Sbi_jg5912
Amaranthaceae Salicornia europaea 1 Seu_jg28099
Amaranthaceae Suaeda aralocaspica 1 GOSA_00013459
Amaranthaceae Suaeda glauca 1 Sgl34663
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000004056, gene:ENSEOMG00000027105
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.6AG0018190, CQ.Regalona.r1.6BG0019260
Anacardiaceae Pistacia vera 1 pistato.v30207330
Apiaceae Apium graveolens 1 Ag5G00788
Casuarinaceae Casuarina equisetifolia 1 Ceq05G0720
Casuarinaceae Casuarina glauca 1 Cgl05G0729
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-9992
Nitrariaceae Nitraria sibirica 1 evm.TU.LG02.2265
Plumbaginaceae Limonium bicolor 1 Lb6G32409
Portulacaceae Portulaca oleracea 2 evm.TU.LG05.223, evm.TU.LG25.1087
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-17164
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-17781
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-15564
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-3134
Salicaceae Populus euphratica 1 populus_peu23512
Tamaricaceae Reaumuria soongarica 1 gene_3438
Tamaricaceae Tamarix chinensis 1 TC11G0540
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