Basic Information
Locus ID:
gene:ENSEOMG00000003949
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 10 | 60898209 | 60904554 | - | gene:ENSEOMG00000003949 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 45,676.19 Da | 48.57 | 83.99 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00023 | Ankyrin repeat | 134 | 159 | 5.9E-5 | IPR002110 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 1 | 118 | 3.5E-14 | IPR020683 |
| SUPERFAMILY | SSF57850 | RING/U-box | 227 | 288 | 1.52E-8 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 2 | 186 | 3.85E-30 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 214 | 300 | 4.9E-8 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 1 | 186 | 3.0E-34 | IPR036770 |
| SMART | SM00248 | ANK_2a | 90 | 119 | 2.1E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 29 | 59 | 1.1 | IPR002110 |
| SMART | SM00248 | ANK_2a | 133 | 165 | 1.7E-4 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 29 | 50 | 9.409914 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 232 | 282 | 9.405901 | IPR001841 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 29 | 50 | 9.430799 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 133 | 159 | 10.68342 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 90 | 119 | 10.073198 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 90 | 122 | 10.73959 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 133 | 159 | 10.71288 | IPR002110 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 247 | 256 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 397 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_021730118.1 | E3 ubiquitin-protein ligase XBAT33-like [Chenopodium quinoa] | 0 |
| Q4FE45 | E3 ubiquitin-protein ligase XBAT33 OS=Arabidopsis thaliana OX=3702 GN=XBAT33 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M0G7 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology