Basic Information
Locus ID:
gene:ENSEOMG00000003692
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 10 | 62021408 | 62024015 | + | gene:ENSEOMG00000003692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 50,983.10 Da | 43.96 | 67.47 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 311 | 393 | 5.5E-18 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 411 | 442 | 5.9E-7 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 311 | 395 | 3.1E-25 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| Coils | Coil | Coil | 303 | 337 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06660.1 | PAPA-1-like family protein / zinc finger (HIT type) family protein. | 0 |
| RefSeq | XP_021774100.1 | uncharacterized protein LOC110738044 isoform X1 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803N6N4 | PAPA-1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology