Basic Information
Locus ID:
gene:ENSEOMG00000003526
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1 | 79898239 | 79905065 | - | gene:ENSEOMG00000003526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 49,695.87 Da | 47.85 | 114.06 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 27 | 428 | 5.05157E-58 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 70 | 389 | 2.3E-25 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 70 | 434 | 4.97E-39 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 56 | 429 | 1.2E-37 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 27 | 435 | 11.186077 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 85 | 101 | - | IPR005829 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 98 | 122 | 2.7E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 67 | 86 | 2.7E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 373 | 396 | 2.7E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 313 | 334 | 2.7E-6 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_021755148.1 | hippocampus abundant transcript-like protein 1 [Chenopodium quinoa] | 0 |
| P51563 | Tetracycline resistance protein, class G OS=Vibrio anguillarum OX=55601 GN=tetA PE=3 SV=1 | 0 | |
| TrEMBL | A0A803KV97 | MFS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology