Basic Information
Locus ID:
gene:ENSEOMG00000003487
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1 | 80021141 | 80022279 | - | gene:ENSEOMG00000003487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 16,081.13 Da | 31.11 | 92.31 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 69 | 130 | 3.42243E-20 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 68 | 130 | 8.9E-15 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 16 | 50 | 0.0029 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 13 | 132 | 1.02E-30 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 5 | 134 | 6.4E-33 | - |
| SMART | SM00054 | efh_1 | 69 | 97 | 7.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 29 | 57 | 1.9 | IPR002048 |
| SMART | SM00054 | efh_1 | 105 | 133 | 1.3E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 25 | 60 | 10.022245 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 101 | 136 | 13.899706 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 65 | 100 | 14.48551 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 78 | 90 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 38 | 50 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 114 | 126 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_021755251.1 | probable calcium-binding protein CML15 [Chenopodium quinoa] | 0 |
| Q9LI84 | Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QEY9 | Calcium-binding protein CML16 OS=Spinacia oleracea OX=3562 GN=SOVF_186650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology