Basic Information
Locus ID:
gene:ENSEOMG00000003450
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1 | 23798980 | 23820358 | - | gene:ENSEOMG00000003450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 112,607.97 Da | 37.30 | 81.31 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 36 | 312 | 0.0 | - |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 880 | 986 | 1.6E-11 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 37 | 349 | 1.8E-92 | IPR000602 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 354 | 444 | 1.3E-21 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 595 | 798 | 7.6E-46 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 456 | 990 | 5.49E-136 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 25 | 350 | 4.06E-107 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 353 | 447 | 3.2E-28 | IPR028995 |
| Gene3D | G3DSA:2.60.40.1180 | - | 464 | 575 | 9.9E-29 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 581 | 846 | 2.3E-91 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 397 | 452 | 7.7E-23 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 866 | 996 | 8.9E-33 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 36 | 317 | 4.6E-121 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 318 | 396 | 5.5E-29 | IPR037094 |
| SMART | SM00872 | Alpha_mann_mid_2 | 354 | 428 | 1.9E-23 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_021736050.1 | probable alpha-mannosidase At5g13980 [Chenopodium quinoa] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MZJ0 | Alpha-mannosidase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology