Basic Information
Locus ID:
gene:ENSEOMG00000002653
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
ubiquitin receptor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 10 | 15853526 | 15855425 | - | gene:ENSEOMG00000002653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.85 | 12,463.98 Da | 60.82 | 80.64 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF09280 | XPC-binding domain | 1 | 41 | 9.1E-14 | IPR015360 |
| Pfam | PF00627 | UBA/TS-N domain | 69 | 102 | 4.9E-14 | IPR015940 |
| SUPERFAMILY | SSF46934 | UBA-like | 48 | 108 | 1.25E-14 | IPR009060 |
| SUPERFAMILY | SSF101238 | XPC-binding domain | 1 | 48 | 1.57E-13 | IPR036353 |
| Gene3D | G3DSA:1.10.8.10 | - | 59 | 107 | 1.5E-22 | - |
| Gene3D | G3DSA:1.10.10.540 | - | 1 | 43 | 1.8E-14 | IPR036353 |
| SMART | SM00165 | uba_6 | 67 | 104 | 9.9E-7 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 64 | 105 | 13.751749 | IPR015940 |
| PRINTS | PR01839 | DNA repair protein Rad23 signature | 12 | 34 | 1.2E-29 | IPR004806 |
| PRINTS | PR01839 | DNA repair protein Rad23 signature | 93 | 108 | 1.2E-29 | IPR004806 |
| PRINTS | PR01839 | DNA repair protein Rad23 signature | 61 | 77 | 1.2E-29 | IPR004806 |
| PRINTS | PR01839 | DNA repair protein Rad23 signature | 78 | 92 | 1.2E-29 | IPR004806 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38470.1 | Rad23 UV excision repair protein family. Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. | 0 |
| RefSeq | XP_021754102.1 | ubiquitin receptor RAD23d-like isoform X4 [Chenopodium quinoa] | 0 |
| Q84L30 | Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2 | 0 | |
| TrEMBL | A0A803KV23 | Ubiquitin receptor RAD23 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology