Basic Information
Locus ID:
gene:ENSEOMG00000002478
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 10 | 61011629 | 61016931 | + | gene:ENSEOMG00000002478 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.67 | 26,075.65 Da | 69.72 | 82.99 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 186 | 228 | 2.51728E-17 | - |
| Pfam | PF13639 | Ring finger domain | 186 | 228 | 1.9E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 186 | 232 | 1.88E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 148 | 233 | 4.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 187 | 227 | 4.6E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 187 | 228 | 11.928664 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 132 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04790.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021765168.1 | E3 ubiquitin ligase BIG BROTHER-like [Chenopodium quinoa] | 0 |
| Q06003 | E3 ubiquitin-protein ligase goliath OS=Drosophila melanogaster OX=7227 GN=gol PE=1 SV=3 | 0 | |
| TrEMBL | A0A0K9RC92 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_083360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology