HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000002416
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: U-box domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
10 59937969 59939431 + gene:ENSEOMG00000002416
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.74 16,555.57 Da 41.32 124.21 0.22
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01989 STK_N 20 144 4.68153E-31 -
SUPERFAMILY SSF52402 Adenine nucleotide alpha hydrolases-like 21 141 2.34E-6 -
Gene3D G3DSA:3.40.50.620 HUPs 16 145 2.6E-5 IPR014729
Best hit
Source Best Hit ID Description E-value
TAIR AT5G61550.1 U-box domain-containing protein kinase family protein. 0
RefSeq XP_021726830.1 U-box domain-containing protein 35-like [Chenopodium quinoa] 0
Swiss-Prot Q9FKG6 U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 0
TrEMBL A0A803MKS8 Serine/threonine-protein kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Beta vulgaris 1 BVRB_3g053410
Amaranthaceae Salicornia bigelovii 1 Sbi_jg6552
Amaranthaceae Chenopodium album 1 gene:ENSEOMG00000002416
Brassicaceae Brassica nigra 1 BniB02g028570.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq08G1395
Plantaginaceae Plantago ovata 2 Pov_00029733, Pov_00040771
Poaceae Lolium multiflorum 1 gene-QYE76_036504
Poaceae Thinopyrum elongatum 1 Tel7E01G177700
Poaceae Zoysia japonica 1 nbis-gene-38007
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.