Basic Information
Locus ID:
gene:ENSEOMG00000002413
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1 | 67702551 | 67716537 | - | gene:ENSEOMG00000002413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 137,679.20 Da | 50.24 | 78.85 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 293 | 422 | 2.48905E-18 | - |
| CDD | cd12108 | Hr-like | 642 | 798 | 5.79329E-29 | - |
| CDD | cd12108 | Hr-like | 34 | 160 | 9.91874E-30 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1109 | 1152 | 9.82997E-16 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 291 | 424 | 3.6E-6 | IPR012312 |
| Pfam | PF13639 | Ring finger domain | 1109 | 1151 | 2.8E-6 | IPR001841 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 638 | 799 | 4.4E-9 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 981 | 1056 | 9.7E-18 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 36 | 162 | 9.3E-12 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1157 | 1214 | 4.7E-24 | IPR039512 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 972 | 1037 | 2.09E-15 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1047 | 1103 | 7.19E-16 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1109 | 1155 | 5.89E-8 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 30 | 180 | 3.3E-32 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1103 | 1154 | 6.5E-9 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 292 | 441 | 1.2E-19 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 633 | 864 | 4.7E-26 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1181 | 1222 | 2.9E-18 | - |
| SMART | SM00184 | ring_2 | 1110 | 1151 | 5.9E-6 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 974 | 1043 | 25.774536 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1046 | 1109 | 29.743618 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1110 | 1152 | 11.205767 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_021753475.1 | zinc finger protein BRUTUS-like [Chenopodium quinoa] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KUY2 | Zinc finger protein BRUTUS OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology