Basic Information
Locus ID:
gene:ENSEOMG00000000764
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 10 | 17718735 | 17728067 | - | gene:ENSEOMG00000000764 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 88,591.85 Da | 49.77 | 71.01 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 673 | 716 | 6.04991E-15 | - |
| CDD | cd12108 | Hr-like | 206 | 362 | 6.19155E-31 | - |
| Pfam | PF14599 | Zinc-ribbon | 721 | 778 | 2.7E-24 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 545 | 620 | 5.3E-18 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 202 | 363 | 1.8E-9 | IPR012312 |
| Pfam | PF13639 | Ring finger domain | 673 | 715 | 1.5E-6 | IPR001841 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 611 | 667 | 4.18E-16 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 672 | 719 | 2.69E-7 | - |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 536 | 601 | 9.94E-16 | IPR037274 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 667 | 718 | 4.0E-9 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 197 | 450 | 2.8E-26 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 745 | 786 | 1.8E-18 | - |
| SMART | SM00184 | ring_2 | 674 | 715 | 5.9E-6 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 610 | 673 | 29.743618 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 538 | 607 | 25.608067 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 674 | 716 | 11.205767 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 121 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_021753475.1 | zinc finger protein BRUTUS-like [Chenopodium quinoa] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KUY2 | Zinc finger protein BRUTUS OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology