Basic Information
Locus ID:
gene:ENSEOMG00000000228
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
AFB3
Description:
transport inhibitor response
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1 | 23014260 | 23017597 | - | gene:ENSEOMG00000000228 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 51,477.03 Da | 42.79 | 99.83 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 40 | 56 | 0.6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 4 | 424 | 2.88E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 465 | 2.2E-151 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 174 | 199 | 200.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 318 | 341 | 310.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 200 | 223 | 75.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 15 | 40 | 35.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 367 | 392 | 200.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 258 | 282 | 1.1 | IPR006553 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26810.1 | auxin signaling F-box 2. | 0 |
| RefSeq | XP_021756048.1 | protein AUXIN SIGNALING F-BOX 2-like [Chenopodium quinoa] | 0 |
| Q9LW29 | Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana OX=3702 GN=AFB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4P9 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_107140 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology