Basic Information
Locus ID:
gene:ENSEOMG00000000191
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 10 | 8590133 | 8592363 | - | gene:ENSEOMG00000000191 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 16,873.25 Da | 47.57 | 70.07 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 72 | 109 | 8.6E-10 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 67 | 111 | 6.45E-12 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 57 | 113 | 7.8E-13 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 72 | 109 | 11.896499 | IPR002893 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 72 | 109 | - | IPR002893 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24560.1 | ubiquitin-specific protease 16. Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation. | 0 |
| RefSeq | XP_021725392.1 | ubiquitin carboxyl-terminal hydrolase 17-like [Chenopodium quinoa] | 0 |
| Q9SB51 | Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana OX=3702 GN=UBP16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MCI2 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology