Basic Information
Locus ID:
evm.TU.utg000033l.484
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000033l | 3814257 | 3817851 | + | evm.TU.utg000033l.484 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 86,207.07 Da | 46.38 | 81.82 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 168 | 2.28342E-44 | - |
| Pfam | PF00069 | Protein kinase domain | 441 | 698 | 3.0E-42 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 17 | 157 | 3.2E-5 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 422 | 698 | 6.2E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 17 | 166 | 2.93E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 408 | 511 | 6.4E-28 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 165 | 2.3E-8 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 512 | 723 | 2.6E-49 | - |
| SMART | SM00220 | serkin_6 | 439 | 702 | 1.6E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 439 | 702 | 36.795761 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 557 | 569 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 729 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 744 | 758 | - | - |
| Coils | Coil | Coil | 305 | 325 | - | - |
| Coils | Coil | Coil | 365 | 411 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_020536636.1 | U-box domain-containing protein 52 isoform X2 [Jatropha curcas] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1WWM1 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G061600 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology