Basic Information
Locus ID:
evm.TU.utg000033l.438
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000033l | 3430879 | 3439139 | + | evm.TU.utg000033l.438 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 202,316.86 Da | 44.10 | 75.22 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1532 | 1795 | 1.55662E-149 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 389 | 661 | 1.11423E-119 | - |
| Pfam | PF01363 | FYVE zinc finger | 33 | 101 | 3.3E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1571 | 1737 | 5.7E-35 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 410 | 656 | 3.7E-30 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 455 | 627 | 8.63E-41 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1530 | 1795 | 3.66E-80 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 102 | 5.28E-20 | IPR011011 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 454 | 627 | 1.5E-51 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1654 | 1796 | 4.3E-43 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 113 | 8.2E-22 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1512 | 1652 | 1.7E-36 | IPR027484 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 2.4E-20 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1505 | 1796 | 2.1E-124 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1470 | 1795 | 58.858162 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 12.751708 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 699 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1245 | 1264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 731 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021596571.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A isoform X1 [Manihot esculenta] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M4X8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology