Basic Information
Locus ID:
evm.TU.utg000033l.379
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
mitogen-activated protein kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000033l | 2990052 | 2993381 | - | evm.TU.utg000033l.379 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 39,677.93 Da | 44.17 | 88.80 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 71 | 338 | 4.24562E-153 | - |
| Pfam | PF00069 | Protein kinase domain | 76 | 333 | 3.2E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 340 | 2.16E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 49 | 152 | 6.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 352 | 1.7E-64 | - |
| SMART | SM00220 | serkin_6 | 73 | 333 | 8.1E-89 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 73 | 333 | 47.565868 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 191 | 203 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 102 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29810.1 | MAP kinase kinase 2. encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. | 0 |
| RefSeq | XP_011009807.1 | PREDICTED: mitogen-activated protein kinase kinase 2-like [Populus euphratica] | 0 |
| A0A1S4CGX4 | Mitogen-activated protein kinase kinase SIPKK OS=Nicotiana tabacum OX=4097 GN=SIPKK PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LAC3 | Uncharacterized protein MANES_03G037000 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg15466, jg31736, jg32898 |
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_11012, gene_20263, gene_9128 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah014671, Ah015217 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g197680 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg24606, Sbi_jg25090, Sbi_jg8465, Sbi_jg8935 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg19661, Seu_jg20125 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00007709, GOSA_00014721 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl42327, Sgl42365, Sgl42890, Sgl47105, Sgl47682 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000008912, gene:ENSEOMG00000032709 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.8AG0015050, CQ.Regalona.r1.8AG0019160 ... |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30101160, pistato.v30257500, pistato.v30259710 |
| Apiaceae | Apium graveolens | 2 | Ag10G01498, Ag8G00267 |
| Arecaceae | Cocos nucifera | 3 | COCNU_06G004630, COCNU_14G003050, scaffold001333G000030 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103711214, gene-LOC103714344, gene-LOC103720812 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.243.V1.1, AsparagusV1_06.835.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri4G18858, Ftri8G12609 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT4G26070.2, AT4G29810.2, AT5G56580.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10013956m.g.v1.0, Thhalv10025480m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp6g18360.v2.2, Sp7g24080.v2.2, Sp7g27620.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB02g035590.2N, BniB02g082260.2N, BniB05g007900.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq06G0825, Ceq06G1572 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl06G0849, Cgl06G1631 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno01g10150, gene.Cymno01g12740 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0024s00003.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g01380, gene.Thate06g15760 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-175 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG07.1168, evm.TU.LG07.1271 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00003434, Pov_00004087, Pov_00039602 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb0G37148, Lb3G16941, Lb7G34232, Lb7G34243 |
| Poaceae | Echinochloa crus-galli | 5 | AH02.3013, AH06.245, BH02.3104, CH02.3419, CH06.340 |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_1AG0031520, gene-QOZ80_1BG0081640 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.4HG0408170.1, HORVU.MOREX.r3.7HG0650300.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_027869, gene-QYE76_070752 |
| Poaceae | Oryza coarctata | 4 | Oco01G011080, Oco11G002250, Oco12G002240, Oco21G003470 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g32660.1, LOC_Os06g05520.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_03G260300, gene-BS78_09G016300, gene-BS78_K316300 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0402217, Pt_Chr0601959, Pt_Chr0604121 |
| Poaceae | Sporobolus alterniflorus | 11 | Chr01G013590, Chr02G010900, Chr05G022710, Chr0G015680 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel4E01G521200, Tel6E01G175000, Tel7E01G199500 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC4AG055280, gene_TRIDC4AG057520 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS4A02G396700.2, TraesCS4A02G414600.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb154530_P002, Zm00001eb377050_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-18350, nbis-gene-26330 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g11039, Zma_g27586, Zma_g31353 |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG02.2355, evm.TU.LG02.2787, evm.TU.LG05.1535 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc03g19830, gene.Posoc03g23750 |
| Rhizophoraceae | Bruguiera sexangula | 4 | evm.TU.60383.2, evm.TU.60384.2 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-25697, nbisL1-mrna-25765 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-12788, nbisL1-mrna-19076, nbisL1-mrna-20187 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-16930, nbisL1-mrna-4606, nbisL1-mrna-4664 |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000008l.1022, evm.TU.utg000008l.1076 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00000139, Maker00001006, Maker00014709 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-14806, nbisL1-mrna-14862, nbisL1-mrna-4003 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-1108, nbisL1-mrna-1175, nbisL1-mrna-8163 |
| Salicaceae | Populus euphratica | 5 | populus_peu05006, populus_peu05071, populus_peu05072 ... |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132633142, gene-LOC132633281, gene-LOC132636897 |
| Solanaceae | Solanum chilense | 2 | SOLCI000531800, SOLCI004334900 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107007412, gene-LOC107012802 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.17970_chr09_-, gene_8038 |
| Tamaricaceae | Tamarix chinensis | 2 | TC10G1509, TC10G1808 |
| Zosteraceae | Zostera marina | 2 | Zosma05g24860.v3.1, Zosma06g00660.v3.1 |