Basic Information
Locus ID:
evm.TU.utg000033l.28
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000033l | 267355 | 269842 | + | evm.TU.utg000033l.28 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 70,456.75 Da | 50.36 | 101.81 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 253 | 276 | 0.0039 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 228 | 251 | 1.5 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 548 | 569 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 188 | 430 | 9.16E-36 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 311 | 654 | 3.34E-33 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 63 | 106 | 1.19E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 460 | 656 | 1.4E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 267 | 459 | 2.2E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 266 | 5.2E-19 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 70 | 104 | 3.1E-5 | - |
| SMART | SM00367 | LRR_CC_2 | 254 | 279 | 1.1E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 280 | 305 | 1.2E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 572 | 595 | 200.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 546 | 571 | 0.048 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 412 | 437 | 87.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 360 | 385 | 0.37 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 202 | 227 | 8.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 624 | 649 | 250.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 519 | 544 | 220.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 466 | 491 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 386 | 411 | 0.75 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 598 | 623 | 24.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 492 | 517 | 0.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 228 | 253 | 3.8E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 439 | 464 | 460.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_050271939.1 | EIN3-binding F-box protein 1-like [Quercus robur] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9GH54 | F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26747 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology