Basic Information
Locus ID:
evm.TU.utg000028l.24
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
heat shock
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000028l | 270648 | 273501 | + | evm.TU.utg000028l.24 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 80,240.20 Da | 36.07 | 82.61 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 16 | 204 | 1.51895E-109 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 29 | 183 | 1.8E-15 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 186 | 684 | 5.3E-234 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 544 | 665 | 3.14E-39 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 265 | 520 | 6.3E-109 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 6 | 215 | 2.36E-75 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 4 | 231 | 2.4E-97 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 433 | 519 | 2.1E-41 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 264 | 432 | 3.1E-85 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 520 | 669 | 1.2E-67 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 29 | 184 | 2.0E-9 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 2 | 701 | 2.7E-259 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 27 | 36 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 28 | 50 | 8.4E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 95 | 112 | 8.4E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 190 | 208 | 8.4E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 77 | 94 | 8.4E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 172 | 189 | 8.4E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 120 | 142 | 8.4E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 7 | 27 | 8.4E-83 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 4 | 666 | 27.370743 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 250 | - | - |
| Coils | Coil | Coil | 229 | 259 | - | - |
| Coils | Coil | Coil | 517 | 544 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_015880753.2 | heat shock cognate protein 80 [Ziziphus jujuba var. spinosa] | 0 |
| P36181 | Heat shock cognate protein 80 OS=Solanum lycopersicum OX=4081 GN=HSC80 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P3ZYQ0 | heat shock cognate protein 80 OS=Ziziphus jujuba OX=326968 GN=LOC107416736 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology