HalophFGD

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Basic Information
Locus ID: evm.TU.utg000027l.110
Species & Taxonomic ID: Kandelia candel & 61147
Genome Assembly: GCA_037832225.1
Description: FBD
Maps and Mapping Data
Chromosome Start End Strand ID
PERG.utg000027l 1301045 1303866 + evm.TU.utg000027l.110
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.24 33,062.07 Da 38.39 109.16 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08387 FBD 202 238 2.3E-8 IPR006566
SUPERFAMILY SSF52058 L domain-like 33 161 4.25E-5 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 7 244 2.3E-7 IPR032675
Best hit
Source Best Hit ID Description E-value
RefSeq XP_028053448.1 putative FBD-associated F-box protein At1g61330 [Camellia sinensis] 0
TrEMBL A0A5B7C2J8 F-box domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_044820 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 6 jg22882, jg26218, jg28878, jg28880, jg28881, jg29020
Rhizophoraceae Kandelia candel 1 evm.TU.utg000027l.110
Solanaceae Lycium barbarum 2 gene-LOC132623410, gene-LOC132640003
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