Basic Information
Locus ID:
evm.TU.utg000023l.35
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000023l | 363041 | 367442 | + | evm.TU.utg000023l.35 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 92,096.89 Da | 46.40 | 80.82 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 22 | 164 | 6.43892E-47 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 461 | 716 | 5.1E-40 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 25 | 158 | 2.2E-8 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 25 | 160 | 7.62E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 442 | 716 | 9.29E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 418 | 532 | 4.6E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 23 | 161 | 7.5E-10 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 533 | 751 | 5.2E-49 | - |
| SMART | SM00220 | serkin_6 | 460 | 727 | 1.6E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 460 | 727 | 34.732197 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 578 | 590 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 210 | - | - |
| Coils | Coil | Coil | 411 | 442 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_038707559.1 | U-box domain-containing protein 52-like isoform X1 [Tripterygium wilfordii] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J7DGV2 | U-box domain-containing protein 52-like OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G01124 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology