Basic Information
Locus ID:
evm.TU.utg000023l.139
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000023l | 1321360 | 1323157 | - | evm.TU.utg000023l.139 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 59,724.81 Da | 33.74 | 98.22 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 43 | 8.6E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 55 | 9.55E-12 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 125 | 432 | 2.38E-11 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 46 | 1.8E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 90 | 346 | 2.4E-11 | IPR032675 |
| SMART | SM00256 | fbox_2 | 10 | 49 | 0.0015 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 52 | 9.073559 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58930.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_006427013.1 | F-box/LRR-repeat protein At4g14103 isoform X2 [Citrus clementina] | 0 |
| Q8GXW6 | F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN=At3g58930 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2LVU8 | F-box domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology