Basic Information
Locus ID:
evm.TU.utg000022l.483
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000022l | 7472022 | 7478312 | + | evm.TU.utg000022l.483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 107,263.57 Da | 48.21 | 84.34 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 757 | 910 | 1.42322E-56 | - |
| Pfam | PF06337 | DUSP domain | 43 | 139 | 8.9E-22 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 317 | 909 | 3.9E-84 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 314 | 912 | 4.12E-110 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 16 | 139 | 2.88E-26 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 662 | 920 | 1.6E-58 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 8 | 153 | 2.0E-32 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 303 | 510 | 4.0E-65 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 154 | 238 | 2.1E-10 | - |
| SMART | SM00695 | dusp | 38 | 142 | 2.3E-26 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 19 | 139 | 18.632954 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 316 | 912 | 57.083778 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 854 | 871 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 317 | 332 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10590.1 | ubiquitin-specific protease 10. encodes a member of the ubiquitin-specific protease family, UBP10 | 0 |
| RefSeq | XP_012086627.2 | ubiquitin carboxyl-terminal hydrolase 9 isoform X1 [Jatropha curcas] | 0 |
| Q93Y01 | Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana OX=3702 GN=UBP9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2KY45 | Ubiquitin carboxyl-terminal hydrolase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology