Basic Information
Locus ID:
evm.TU.utg000019l.778
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 8296959 | 8300758 | + | evm.TU.utg000019l.778 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 39,658.66 Da | 42.36 | 87.95 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 36 | 105 | 1.0E-8 | IPR020683 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 142 | 284 | 3.5E-19 | IPR001245 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 28 | 110 | 2.64E-18 | IPR036770 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 140 | 283 | 7.44E-29 | IPR011009 |
| Gene3D | G3DSA:1.25.40.20 | - | 21 | 108 | 8.7E-20 | IPR036770 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 312 | 4.3E-31 | - |
| SMART | SM00248 | ANK_2a | 85 | 116 | 1900.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 52 | 81 | 4.8E-5 | IPR002110 |
| PIRSF | PIRSF000654 | ILK | 2 | 314 | 1.2E-76 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 139 | 347 | 19.297869 | IPR000719 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 52 | 84 | 12.66271 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 52 | 84 | 11.293642 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 313 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18950.2 | - | 0 |
| RefSeq | XP_021603433.1 | integrin-linked protein kinase 1 [Manihot esculenta] | 0 |
| Q93Z30 | Serine/threonine-protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=BHP PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WBP5 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G072900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag4G00547 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.2909.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G12649 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00029649, Pov_00029657 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_3_RagTag.720, evm.TU.Scaffold_3_RagTag.721 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1240 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13793 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6407 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.778 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012750 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5245 |
| Salicaceae | Populus euphratica | 1 | populus_peu24920 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132623793 |
| Solanaceae | Solanum chilense | 1 | SOLCI007409100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009611 |