Basic Information
Locus ID:
evm.TU.utg000019l.749
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 8059531 | 8061371 | + | evm.TU.utg000019l.749 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 54,019.89 Da | 34.17 | 89.70 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 25 | 344 | 2.9E-80 | IPR000490 |
| Pfam | PF07983 | X8 domain | 362 | 433 | 5.4E-17 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 25 | 344 | 1.0E-85 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 350 | 1.3E-114 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 355 | 447 | 4.7E-10 | - |
| SMART | SM00768 | X8_cls | 361 | 446 | 1.1E-44 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 259 | 272 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021640736.1 | glucan endo-1,3-beta-glucosidase 2-like isoform X2 [Hevea brasiliensis] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | A0A067JPI9 | glucan endo-1,3-beta-D-glucosidase OS=Jatropha curcas OX=180498 GN=JCGZ_22504 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology