Basic Information
Locus ID:
evm.TU.utg000019l.712
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 7577540 | 7581530 | + | evm.TU.utg000019l.712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 58,914.19 Da | 39.93 | 78.38 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 350 | 472 | 7.40172E-61 | - |
| Pfam | PF16953 | Protein-only RNase P | 292 | 518 | 3.9E-73 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 35 | 251 | 2.1E-76 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 42 | 521 | 2.2E-234 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 310 | 484 | 2.2E-234 | - |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 50 | 77 | 6.4E-4 | IPR002885 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_002526061.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 [Ricinus communis] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | B9SJ92 | ribonuclease P OS=Ricinus communis OX=3988 GN=RCOM_1478990 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology