Basic Information
Locus ID:
evm.TU.utg000019l.565
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 4620778 | 4624102 | + | evm.TU.utg000019l.565 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 51,740.40 Da | 37.39 | 87.64 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 151 | 415 | 7.7E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 126 | 415 | 9.84E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 226 | 436 | 1.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 124 | 225 | 6.4E-24 | - |
| SMART | SM00220 | serkin_6 | 148 | 415 | 9.1E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 148 | 422 | 35.495434 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 269 | 281 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 154 | 177 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034932994.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Populus alba] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JTB5 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology