Basic Information
Locus ID:
evm.TU.utg000019l.391
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 2939276 | 2943585 | + | evm.TU.utg000019l.391 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 96,393.91 Da | 36.73 | 97.92 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 561 | 834 | 1.60492E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 383 | 424 | 1.3E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 556 | 829 | 4.7E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 88 | 144 | 6.7E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 322 | 360 | 0.019 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 59 | 5.1E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 536 | 831 | 9.72E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 437 | 7.48E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 322 | 447 | 1.0E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 518 | 632 | 2.9E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 633 | 853 | 8.7E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 321 | 1.1E-66 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 411 | 434 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 410 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 207 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 86 | 108 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 555 | 835 | 1.6E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 3.1E-4 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 555 | 835 | 41.573055 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 680 | 692 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 561 | 583 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 874 | 889 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 889 | - | - |
| Coils | Coil | Coil | 888 | 889 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_050237128.1 | receptor-like kinase TMK4 [Mercurialis annua] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A127AUM3 | LRR-RLK OS=Vernicia fordii OX=73154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology