Basic Information
Locus ID:
evm.TU.utg000019l.29
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Glycosyl transferase family 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 185279 | 190016 | - | evm.TU.utg000019l.29 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 103,541.43 Da | 56.68 | 76.51 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01697 | Glycosyltransferase family 92 | 277 | 500 | 2.1E-35 | IPR008166 |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 683 | 721 | 9.0E-6 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 675 | 746 | 4.78E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 625 | 752 | 9.1E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 683 | 721 | 8.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 683 | 722 | 12.238477 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 698 | 707 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 817 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 816 | 841 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 592 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 614 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27330.1 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_012071253.1 | glycosyltransferase family 92 protein RCOM_0530710 [Jatropha curcas] | 0 |
| B9SLR1 | Glycosyltransferase family 92 protein RCOM_0530710 OS=Ricinus communis OX=3988 GN=RCOM_0530710 PE=3 SV=1 | 0 | |
| TrEMBL | A0A836EGB4 | UPF0392 protein OS=Salix suchowensis OX=1278906 GN=IMY05_001G0211900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology